Shigeki Nakagome: search on Z-Library

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1

A time transect of exomes from a Native American population before and after European contact

Lindo, John, Huerta-Sánchez, Emilia, Nakagome, Shigeki, Rasmussen, Morten, Petzelt, Barbara, Mitchell, Joycelynn, Cybulski, Jerome S., Willerslev, Eske, DeGiorgio, Michael, Malhi, Ripan S.

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 765 KB

english, 2016

2

Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations

Gakuhari, Takashi, Nakagome, Shigeki, Rasmussen, Simon, Allentoft, Morten E., Sato, Takehiro, Korneliussen, Thorfinn, ChuinneagÃ¡in, BlÃ¡naid NÃ, Matsumae, Hiromi, Koganebuchi, Kae, Schmidt, Ryan, Mi

Journal:

Communications Biology

Year:

2020

File:

PDF, 2.08 MB

2020

3

Population-Specific Susceptibility to Crohn's Disease and Ulcerative Colitis; Dominant and Recessive Relative Risks in the Japanese Population

Shigeki Nakagome, Yasuaki Takeyama, Shuhei Mano, Shotaro Sakisaka, Toshiyuki Matsui, Shoji Kawamura, Hiroki Oota

Journal:

Annals of Human Genetics

Year:

2010

Language:

english

File:

PDF, 155 KB

english, 2010

4

Biogeography Revealed byMariner-Like Transposable Element Sequences via a Bayesian Coalescent Approach

Nakagome, Shigeki, Nakajima, Yumiko, Mano, Shuhei

Journal:

Journal of Molecular Evolution

Year:

2013

Language:

english

File:

PDF, 382 KB

english, 2013

5

Kernel approximate Bayesian computation in population genetic inferences

Nakagome, Shigeki, Fukumizu, Kenji, Mano, Shuhei

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 2.05 MB

english, 2013

6

Estimating the ages of selection signals from different epochs in human history

Nakagome, Shigeki, Alkorta-Aranburu, Gorka, Amato, Roberto, Howie, Bryan, Peter, Benjamin M., Hudson, Richard R., Di Rienzo, Anna

Journal:

Molecular Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 8.79 MB

english, 2015

7

On the use of kernel approximate Bayesian computation to infer population history

Nakagome, Shigeki

Journal:

Genes & Genetic Systems

Year:

2015

Language:

english

File:

PDF, 539 KB

english, 2015

8

Confounding effects of microbiome on the susceptibility ofTNFSF15to Crohn’s disease in the Ryukyu Islands

Nakagome, Shigeki, Chinen, Hiroshi, Iraha, Atsushi, Hokama, Akira, Takeyama, Yasuaki, Sakisaka, Shotaro, Matsui, Toshiyuki, Kidd, Judith R., Kidd, Kenneth K., Said, Heba S., Suda, Wataru, Morita, Hide

Journal:

Year:

2017

Language:

english

File:

PDF, 1.05 MB

english, 2017

9

Colonic transcriptional response to 1α,25(OH) 2 vitamin D 3 in African- and European-Americans

Alleyne, Dereck, Witonsky, David B., Mapes, Brandon, Nakagome, Shigeki, Sommars, Meredith, Hong, Ellie, Muckala, Katy A., Di Rienzo, Anna, Kupfer, Sonia S.

Journal:

The Journal of Steroid Biochemistry and Molecular Biology

Year:

2017

Language:

english

File:

PDF, 1.72 MB

english, 2017

10

Patterns of Transcriptional Response to 1,25-Dihydroxyvitamin D3 and Bacterial Lipopolysaccharide in Primary Human Monocytes

Kariuki, Silvia N., Blischak, John D., Nakagome, Shigeki, Witonsky, David B., Di Rienzo, Anna

Journal:

G3 Genes|Genome|Genetics

Year:

2016

Language:

english

File:

PDF, 1.34 MB

english, 2016

11

Ancestral Polymorphisms and Sex-Biased Migration Shaped the Demographic History of Brown Bears and Polar Bears

Nakagome, Shigeki, Mano, Shuhei, Hasegawa, Masami, O’Rourke, Dennis

Journal:

Year:

2013

Language:

english

File:

PDF, 493 KB

english, 2013

12

Mapping Variation in Cellular and Transcriptional Response to 1,25-Dihydroxyvitamin D3 in Peripheral Blood Mononuclear Cells

Kariuki, Silvia N., Maranville, Joseph C., Baxter, Shaneen S., Jeong, Choongwon, Nakagome, Shigeki, Hrusch, Cara L., Witonsky, David B., Sperling, Anne I., Di Rienzo, Anna, Nerurkar, Pratibha V.

Journal:

Year:

2016

Language:

english

File:

PDF, 755 KB

english, 2016

13

Fine-tuning of Approximate Bayesian Computation for human population genomics

Cooke, Niall P., Nakagome, Shigeki

Journal:

Current Opinion in Genetics & Development

Year:

2018

Language:

english

File:

PDF, 847 KB

english, 2018

14

Rapid evolution of a skin-lightening allele in southern African KhoeSan

Lin, Meng, Siford, Rebecca L., Martin, Alicia R., Nakagome, Shigeki, Möller, Marlo, Hoal, Eileen G., Bustamante, Carlos D., Gignoux, Christopher R., Henn, Brenna M.

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.06 MB

english, 2018

15

Inferring the model and onset of natural selection under varying population size from the site frequency spectrum and haplotype structure

Nakagome, Shigeki, Hudson, Richard R., Di Rienzo, Anna

Journal:

Proceedings Biological Sciences

Year:

2019

File:

PDF, 639 KB

2019

16

Genomic profiling of intestinal T-cell receptor repertoires in inflammatory bowel disease

Saravanarajan, Keerthana, Douglas, Atiyekeogbebe Rita, Ismail, Mohd Syafiq, Omorogbe, Joseph, Semenov, Serhiy, Muphy, Greg, OâRiordan, Fiona, McNamara, Deirdre, Nakagome, Shigeki

Journal:

Genes and Immunity

Year:

2020

Language:

english

File:

PDF, 1.32 MB

english, 2020

17

The evolving Japanese: the dual structure hypothesis at 30

Hudson, Mark J., Nakagome, Shigeki, Whitman, John B.

Journal:

Evolutionary Human Sciences

Year:

2020

File:

PDF, 280 KB

2020

18

Autosomal and Y-chromosomal STR markers reveal a close relationship between Hokkaido Ainu and Ryukyu islanders

KOGANEBUCHI, KAE, KATSUMURA, TAKAFUMI, NAKAGOME, SHIGEKI, ISHIDA, HAJIME, KAWAMURA, SHOJI, OOTA, HIROKI, THE ASIAN ARCHIVAL DNA REPOSITORY CONSORTIUM,

Journal:

Anthropological Science

Year:

2012

File:

PDF, 295 KB

2012